[Pyrex] array setting and math function annoyance

[Arc Riley]

> Yes, we handle submodule naming based on the directory hierarchy to
> be consistent with Python. Sorry this doesn't work for you.
>

It's also consistent with Python that classes, such as those in
Cython.Compiler, can have their methods overridden through class
inheritance.

Can you point to the function or functions which implement the extension
naming  so we can make Cython behave as we need it?
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